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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
100
monocyte
85
stomach
84
heart
71
brain
67
lung
66
muscle of arm
64
HeLa-S3
64
kidney
63
small intestine
62
A549
61
adrenal gland
60
placenta
57
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
48
thymus
46
H1-hESC
46
liver
45
right lung
44
CD8-positive, alpha-beta T cell
44
neural progenitor cell
42
hematopoietic multipotent progenitor cell
41
K562
41
right kidney
39
renal cortex interstitium
39
renal pelvis
36
B cell
36
left kidney
35
spinal cord
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
spleen
30
heart left ventricle
29
islet of Langerhans
28
adipose tissue
26
MCF-7
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
adipocyte
22
body of pancreas
22
foreskin keratinocyte
21
tibial nerve
20
breast cancer cell
20
caudate nucleus
20
mononuclear cell
20
psoas muscle
20
retina
19
foreskin fibroblast
19
keratinocyte
19
ovary
18
HFFc6
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
18
macrophage
18
natural killer cell
18
pancreas
18
thyroid gland
18
transverse colon
17
T cell
17
embryonic stem cell
17
fibroblast
17
mesenchymal stem cell
17
muscle of trunk
17
regulatory T cell
16
GM12878
16
HepG2
16
chorionic villus
16
fibroblast of lung
16
heart right ventricle
16
hepatocyte
16
layer of hippocampus
16
substantia nigra
16
testis
16
upper lobe of left lung
15
endothelial cell
15
mammary gland epithelial cell
15
neutrophil
15
right atrium auricular region
15
skeletal muscle tissue
15
smooth muscle cell
15
tibial artery
14
CD4-positive, alpha-beta T cell
14
H9
14
cardiac muscle cell
14
coronary artery
14
endocrine pancreas
14
fibroblast of cardiac tissue
14
omental fat pad
14
prostate gland
14
skeletal muscle myoblast
14
subcutaneous adipose tissue
13
Peyer's patch
13
ascending aorta
13
bronchial epithelial cell
13
cerebellum
13
neurosphere
13
putamen
12
EndoC_BH1
12
T-helper 1 cell
12
T-helper 17 cell
12
aorta
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
osteoblast
12
pancreatic ductal cell
11
T-helper 2 cell
11
breast epithelium
11
epithelial cell of prostate
11
frontal cortex
11
retinal pigment epithelial cell
11
temporal lobe
10
22Rv1
10
Ammon's horn
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left renal cortex interstitium
10
lymphocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
neuronal stem cell
10
right renal cortex interstitium
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
endothelial cell of hepatic sinusoid
9
esophagus
9
left cardiac atrium
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
pericyte cell
9
right renal pelvis
9
skin fibroblast
9
thoracic aorta
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
choroid plexus epithelial cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
astrocyte
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
kidney tubule cell
7
mature neutrophil
7
right lobe of liver
7
skeletal muscle satellite cell
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM23248
6
HAP-1
6
HUES8
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2023
annotation_type!
gene expression
files.file_type!
bigWig
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP