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Citing CMDGA
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Annotation type
1545
candidate regulatory elements
1273
target gene predictions
929
histone modifications
866
chromatin state
844
accessible chromatin
800
binding sites
663
gene expression
166
differential activity
141
eQTL
122
variant allelic effects
38
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
3
DNA methylation profiling by array assay
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
3
adult
Date released
3
May, 2021
Software used
3
limix
3
minfi
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
February, 2023
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brain
spleen
Showing 3 of 3 results
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FileSet
DSR135HUG
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 132 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR197ERC
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP