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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
3
differential activity
3
gene expression
2
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
1
bam
1
bed gappedPeak
1
bigBed narrowPeak
1
xls
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
8
EndoC_BH1
7
islet of Langerhans
7
pancreatic ductal cell
6
pancreatic acinar cell
6
pancreatic beta cell
5
pancreas
5
pancreatic alpha cell
3
pancreatic delta cell
3
pancreatic stellate cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic polypeptide-secreting cell
1
type B pancreatic cell
Organ
3
epithelium
3
pancreas
Life stage
1
adult
1
unknown
Date released
January, 2021
1
February, 2024
1
November, 2021
1
September, 2022
Software used
3
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
month_released!
January, 2021
organ_slims!
limb
Showing 3 of 3 results
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Download
FileSet
DSR025RWZ
released
Annotation file set
: Accessible chromatin from snATAC-seq of delta cells from human pancreatic islet samples
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR181PDQ
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Delta,Gamma cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR119NFC
released
Annotation file set
: pancreatic delta cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP