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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
87
heart
84
stomach
74
kidney
70
brain
67
muscle of arm
66
lung
62
small intestine
60
adrenal gland
59
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
48
thymus
46
liver
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
32
heart left ventricle
32
spleen
30
islet of Langerhans
30
spinal cord
28
adipose tissue
23
sigmoid colon
21
pancreas
20
pigmented layer of retina
20
psoas muscle
19
ovary
18
body of pancreas
18
gastrocnemius medialis
18
heart right ventricle
18
thyroid gland
18
tibial nerve
18
transverse colon
17
muscle of trunk
16
caudate nucleus
16
chorionic villus
16
testis
16
upper lobe of left lung
15
coronary artery
15
endocrine pancreas
15
layer of hippocampus
15
skeletal muscle tissue
14
Peyer's patch
13
prostate gland
13
temporal lobe
13
tibial artery
12
aorta
12
left renal cortex interstitium
12
left renal pelvis
12
omental fat pad
12
right atrium auricular region
12
right renal pelvis
11
ascending aorta
11
breast epithelium
11
esophagus squamous epithelium
11
left cardiac atrium
11
right renal cortex interstitium
11
substantia nigra
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
esophagus muscularis mucosa
10
lower leg skin
10
subcutaneous adipose tissue
9
cerebellum
9
cingulate gyrus
9
duodenal mucosa
9
esophagus
9
eye
9
frontal cortex
9
mucosa of rectum
9
parathyroid adenoma
9
stomach smooth muscle
9
tongue
8
globus pallidus
8
limb
8
midbrain
8
muscle layer of colon
8
muscle layer of duodenum
8
putamen
8
urinary bladder
8
vagina
7
Ammon's horn
7
gastroesophageal sphincter
7
occipital lobe
7
right cardiac atrium
7
superior temporal gyrus
7
uterus
6
Brodmann (1909) area 46
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
cartilage tissue
5
cerebellar cortex
5
germinal matrix
4
amnion
4
embryonic facial prominence
4
femur
4
inferior parietal cortex
4
mucosa of stomach
4
rectum smooth muscle tissue
4
right lobe of liver
3
arm bone
3
cortex of kidney
3
germinal center
3
leg bone
3
prefrontal cortex
3
skin of body
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
blood
2
breast carcinoma
2
chorion
2
endometrium cancer
2
first pancreatic bud
2
forelimb muscle
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder (urinary bladder)
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
Date released
1
February, 2024
Software used
1
macs
Lab
1
Kyle Gaulton, UCSD
Project
1
AMP
RFA
1
AMP
month_released!
January, 2022
files.file_type!
tsv
Showing 1 of 1 results
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Download
FileSet
DSR062PXW
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Schwann
Lab:
Kyle Gaulton, UCSD
Project:
AMP