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Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
2
accessible chromatin
2
binding sites
2
chromatin state
2
histone modifications
Annotation Category
4
Target gene links
Annotation type Category
4
DNase-seq
2
ATAC-seq
2
ChIP-seq
2
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
23
K562
14
large intestine
8
GM12878
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HT-29
2
NAMALWA cell
2
OCI-LY7
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
1
CMK
1
DOHH2
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM18505
1
GM19099
1
GM19193
1
HCT-116 cell
1
HL-60
1
KBM-7
1
NB4
1
RPMI8226
1
SU-DHL-6
1
SW480
1
rectum smooth muscle tissue
Disease term
1
colorectal adenocarcinoma
Organ
2
blood
2
bodily fluid
2
intestine
2
large intestine
Life stage
2
adult
Date released
2
May, 2021
2
September, 2022
Software used
2
abc
2
r
Lab
2
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
month_released!
January, 2022
Showing 4 of 4 results
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Download
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR765USM
released
Annotation file set
: Target gene predictions for BSS00491 HAP-1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR155AOX
released
Annotation file set
: enhancer-gene predicton of HAP1 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP