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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
5
chromatin state
2
target gene predictions
1
gene expression
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
4
bed bed9
2
bigBed bed9
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
18
brain
5
temporal lobe
4
angular gyrus
4
caudate nucleus
4
layer of hippocampus
3
cingulate gyrus
3
substantia nigra
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
frontal cortex
1
A172
1
Ammon's horn
1
BE(2)-C
1
Daoy
1
H54
1
M059J
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
Organ
21
heart
5
brain
Life stage
4
adult
Date released
2
May, 2019
2
September, 2022
1
August, 2017
Software used
5
chromhmm
Lab
4
AMP-T2D consortium
1
Stephen Parker, UMich
Project
5
AMP
RFA
5
AMP
month_released!
June, 2021
Showing 5 of 5 results
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Download
FileSet
DSR845QCJ
released
Annotation file set
: Chromatin states for BSS01714 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR518MEA
released
Annotation file set
: Chromatin states for BSS01712 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR708XYC
released
Annotation file set
: ChromHMM 18-state model for temporal lobe from ENCODE ChIP-seq data. ROADMAP Brain Inferior Temporal Lobe Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097ASI
released
Annotation file set
: ChromHMM 15-state model for temporal lobe from ENCODE ChIP-seq data. ROADMAP Brain Inferior Temporal Lobe Annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR798820
released
Annotation file set
: ChromHMM 13-state model for Inferior temporal lobe
Lab:
Stephen Parker, UMich
Project:
AMP