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Schema
Citing CMDGA
Clear Filters
Annotation type
1510
candidate regulatory elements
1108
target gene predictions
971
histone modifications
862
chromatin state
813
accessible chromatin
804
binding sites
407
gene expression
161
eQTL
106
differential activity
74
Fine-mapped variants
68
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
4
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
islet of Langerhans
2
tissue
Organ
2
pancreas
Date released
2
March, 2023
1
August, 2020
1
August, 2022
Software used
2
combined S2G strategy
2
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
June, 2021
February, 2024
organ_slims!
kidney
Showing 4 of 4 results
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619JSP
released
Annotation file set
: Variant to gene predictions in UK biobank
Lab:
AMP-T2D consortium
Project:
AMP