Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
0
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
Biosample term
43
stomach
42
heart
39
kidney
34
muscle of arm
33
lung
31
brain
30
small intestine
29
adrenal gland
29
muscle of leg
29
retina
28
large intestine
28
muscle of back
27
placenta
26
left lung
23
right lung
22
A549
21
renal cortex interstitium
21
renal pelvis
21
right kidney
21
thymus
20
hematopoietic multipotent progenitor cell
20
pigmented layer of retina
18
left kidney
17
liver
17
spleen
16
spinal cord
15
neural progenitor cell
14
heart left ventricle
11
sigmoid colon
10
MCF-7
10
pancreas
9
adipose tissue
9
gastrocnemius medialis
9
ovary
9
thyroid gland
9
tibial nerve
9
transverse colon
8
EndoC_BH1
8
K562
8
Peyer's patch
8
adipocyte
8
body of pancreas
8
chorionic villus
8
muscle of trunk
8
psoas muscle
8
testis
8
upper lobe of left lung
7
H9
7
caudate nucleus
7
endocrine pancreas
7
esophagus squamous epithelium
7
heart right ventricle
7
left renal cortex interstitium
7
left renal pelvis
7
omental fat pad
7
right renal pelvis
6
SGBS preadipocytes
6
breast epithelium
6
coronary artery
6
embryonic stem cell
6
esophagus muscularis mucosa
6
islet of Langerhans
6
layer of hippocampus
6
lower leg skin
6
retinal pigment epithelial cell
6
right atrium auricular region
6
right renal cortex interstitium
6
skeletal muscle tissue
6
tibial artery
5
HeLa-S3
5
SK-N-DZ
5
WI38
5
ascending aorta
5
cardiac muscle cell
5
chondrocyte
5
eye
5
gastroesophageal sphincter
5
parathyroid adenoma
5
prostate gland
5
subcutaneous abdominal adipose tissue
5
substantia nigra
5
temporal lobe
5
thoracic aorta
5
tongue
5
trophoblast
4
22Rv1
4
Ammon's horn
4
HEK293
4
HepG2
4
SK-N-SH
4
angular gyrus
4
aorta
4
cerebellum
4
chorion membrane
4
cingulate gyrus
4
colonic mucosa
4
duodenal mucosa
4
endodermal cell
4
esophagus
4
frontal cortex
4
globus pallidus
4
limb
4
mesenchymal stem cell
4
mesodermal cell
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
putamen
4
stomach smooth muscle
4
subcutaneous adipose tissue
4
urinary bladder
4
uterus
4
vagina
3
A172
3
ACHN
3
CMK
3
Caki2
3
Daoy
3
GM04503
3
GM04504
3
GM06990
3
GM10248
3
GM10266
3
GM12864
3
GM12865
3
GM12878
3
GM23248
3
H4
3
HAP-1
3
HL-60
3
HT-29
3
HUES6
3
IMR-90
3
KBM-7
3
L1-S8
3
LHCN-M2
3
LNCAP
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MG63
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-3
3
PC-9
3
RCC 7860
3
RPMI7951
3
RPMI8226
3
RWPE1
3
SJCRH30
3
SJSA1
3
SK-N-MC
3
SW480
3
T47D
3
WERI-Rb-1
3
bipolar neuron
3
cerebellar cortex
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
left cardiac atrium
3
medulla oblongata
3
mesendoderm
3
midbrain
3
middle frontal gyrus
3
neural cell
3
neuronal stem cell
3
occipital lobe
3
pons
3
superior temporal gyrus
3
suprapubic skin
3
umbilical cord
2
A673
2
ACC112
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
B cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
C4-2B
2
Caco-2 cell
2
DND-41
2
DOHH2
2
EH
2
EL
2
ELF-1
2
ELR
2
G401
2
GM03348
2
GM08714
2
GM12875
2
GM13976
2
GM13977
2
GM18507
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
March, 2023
biosample_type!
primary cell
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR589PDF
released
Annotation file set
: Accessible chromatin annotation for Blood CD8+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP