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Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
935
chromatin state
888
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
166
differential activity
139
variant allelic effects
74
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
8
Genetic variant effects
Annotation type Category
5
snATAC-seq
3
ATAC-seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
tissue
Biosample term
2
CD4-positive helper T cell
1
endothelial cell
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
1
liver
Date released
7
October, 2022
February, 2023
1
May, 2022
Software used
6
eigenmt
6
rasqual
2
matrix-eQTL
Lab
5
Stephen Parker, UMich
2
Stephen S. Rich Lab @UVA
1
Karen Mohlke, UNC
Project
6
AMP
2
T1D
RFA
5
AMP2
2
T1D
1
AMP
month_released!
May, 2019
February, 2023
Showing 8 of 8 results
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FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP