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Annotation type
3
variant allelic effects
Annotation Category
3
Genetic variant effects
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
6
fibroblast
3
enterocyte
3
macrophage
3
myofibroblast cell
2
Schwann cell
2
T cell
2
basal cell
2
endothelial cell
2
epithelial cell of esophagus
2
goblet cell
2
skeletal muscle fiber
2
smooth muscle cell
2
vascular associated smooth muscle cell
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cortical cell of adrenal gland
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
thyroid follicular cell
1
type II pneumocyte
Organ
1
connective tissue
Date released
3
February, 2024
Software used
17
macs
10
abc
10
r
7
chromhmm
3
deltasvm
3
encode-ccres
2
deeptools
2
samtools
2
umitools
1
eigenmt
1
qTLtools
1
rasqual
Lab
3
Bing Ren, UCSD
Project
3
AMP
RFA
3
AMP
month_released!
May, 2020
Showing 3 of 3 results
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Download
FileSet
DSR475VRW
released
Annotation file set
: Variant allelic effects annotation of Smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR798NUZ
released
Annotation file set
: Variant allelic effects annotation of Smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP