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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
histone modifications
1
accessible chromatin
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
1
ATAC-seq
1
pCHi-C
Available data
6
bed bed3+
File set status
7
released
Genome assembly (visualization)
6
hg19
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
cell line
Biosample term
87
heart
84
stomach
80
kidney
72
brain
68
lung
66
muscle of arm
63
HeLa-S3
62
small intestine
61
A549
60
adrenal gland
59
placenta
57
muscle of leg
55
large intestine
54
muscle of back
53
H1-hESC
53
common myeloid progenitor, CD34-positive
52
left lung
51
neural progenitor cell
48
liver
46
thymus
45
right lung
42
hematopoietic multipotent progenitor cell
40
K562
40
right kidney
39
endothelial cell
39
islet of Langerhans
39
renal cortex interstitium
39
renal pelvis
39
retina
38
B cell
36
left kidney
35
hepatocyte
34
spinal cord
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
32
heart left ventricle
32
spleen
29
adipose tissue
29
macrophage
25
MCF-7
24
regulatory T cell
24
smooth muscle cell
23
pancreatic ductal cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
adipocyte
22
body of pancreas
22
epithelial cell of proximal tubule
22
foreskin keratinocyte
22
pericyte cell
22
sigmoid colon
22
tibial nerve
21
caudate nucleus
21
natural killer cell
20
breast cancer cell
20
glomerular endothelial cell
20
keratinocyte
20
mononuclear cell
20
pigmented layer of retina
20
subcutaneous adipose tissue
20
trophoblast cell
19
T-helper 1 cell
19
ovary
19
pancreas
19
psoas muscle
18
HFFc6
18
foreskin fibroblast
18
heart right ventricle
18
mesenchymal stem cell
18
substantia nigra
17
T-helper 17 cell
17
coronary artery
17
gastrocnemius medialis
17
omental fat pad
17
pancreatic beta cell
17
right atrium auricular region
17
testis
17
thyroid gland
17
transverse colon
16
CD14-positive monocyte
16
HepG2
16
astrocyte
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
fibroblast of cardiac tissue
16
layer of hippocampus
16
muscle of trunk
16
osteoblast
16
retinal pigment epithelial cell
16
skeletal muscle tissue
16
upper lobe of left lung
15
cardiac muscle cell
15
cerebellum
15
fibroblast of lung
15
induced pluripotent stem cell
15
mammary gland epithelial cell
15
pancreatic alpha cell
15
pancreatic delta cell
15
tibial artery
14
GM12878
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
pancreatic acinar cell
14
prostate gland
13
CD4-positive, alpha-beta T cell
13
CD8-positive, alpha-beta T cell
13
H9
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
putamen
13
skeletal muscle myoblast
13
skeletal muscle satellite cell
13
temporal lobe
12
Ammon's horn
12
T-helper 2 cell
12
lymphoblastoid cell line
12
neuroblastoma cell
11
fibroblast of dermis
11
glomerular visceral epithelial cell
11
mammary epithelial cell
10
22Rv1
10
Rhabdomyosarcoma
10
breast epithelium
10
epithelial cell of prostate
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
left cardiac atrium
10
lymphocyte
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
skin fibroblast
10
trophoblast
9
SK-N-DZ
9
cardiomyocytes
9
choroid plexus epithelial cell
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
hepatic stellate cell
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
monocyte
9
neuronal stem cell
9
parathyroid adenoma
9
right renal cortex interstitium
9
thoracic aorta
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
NAMALWA cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
neutrophil
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BJ cell
7
GM06990
7
GM12864
7
HT-29
7
IMR-90
7
SK-N-MC
7
SK-N-SH
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
erythroblast
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
mature neutrophil
Date released
May, 2021
5
February, 2021
1
March, 2020
1
November, 2022
Software used
6
macs
1
nospecificsoft_customcode
Lab
6
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
7
AMP
RFA
6
AMP
1
AMP2
month_released!
May, 2020
May, 2021
biosample_term_name!
left cardiac atrium
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR455VRI
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR134CON
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161DPJ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell KhES-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR084KAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_VAL-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR026FET
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell Embryonic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DUM
released
Annotation file set
: A target gene prediction annotation in Human Human ES Cells of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP