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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
RNA-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
1
tissue
Biosample term
87
heart
86
stomach
80
kidney
72
brain
68
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
H1-hESC
54
muscle of back
52
left lung
50
neural progenitor cell
47
liver
47
thymus
45
right lung
43
hematopoietic multipotent progenitor cell
41
K562
41
islet of Langerhans
40
right kidney
39
renal cortex interstitium
39
renal pelvis
39
retina
36
left kidney
35
spinal cord
34
spleen
32
heart left ventricle
30
adipose tissue
26
MCF-7
23
body of pancreas
23
sigmoid colon
22
EndoC_BH1
22
tibial nerve
21
adipocyte
21
caudate nucleus
20
breast cancer cell
20
ovary
20
pancreas
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
HFFc6
18
coronary artery
18
gastrocnemius medialis
18
heart right ventricle
18
substantia nigra
18
thyroid gland
18
transverse colon
17
HepG2
17
embryonic stem cell
17
muscle of trunk
17
omental fat pad
17
right atrium auricular region
17
testis
16
GM12878
16
H9
16
chorionic villus
16
induced pluripotent stem cell
16
layer of hippocampus
16
skeletal muscle tissue
16
upper lobe of left lung
15
cerebellum
15
tibial artery
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
prostate gland
13
Peyer's patch
13
aorta
13
putamen
13
temporal lobe
12
Ammon's horn
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
11
breast epithelium
11
cardiac muscle cell
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal cortex interstitium
9
thoracic aorta
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
MM.1S
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
KARPAS-422 cell
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
neuronal stem cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
cardiomyocytes (cardiac muscle cell)
6
chondrocyte
6
globus pallidus
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
mesodermal cell
6
mucosa of rectum
6
neuroblastoma cell line
6
nucleus accumbens
6
pancreatic ductal cell
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
CyT49
Organ
2
epithelium
Date released
1
February, 2024
1
May, 2021
Software used
1
macs
1
r
Lab
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
RFA
2
AMP
month_released!
May, 2020
May, 2022
biosample_type!
primary cell
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR369PUU
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Endothelial
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR669UJX
released
Annotation file set
: Gene expression annotation of endothelial cell_EC ISL1-PECAM1+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP