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Schema
Citing CMDGA
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Annotation type
2
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
in vitro differentiated cells
3
cell line
Biosample term
116
monocyte
58
HeLa-S3
49
heart
47
stomach
46
CD8-positive, alpha-beta T cell
46
kidney
44
H1-hESC
40
brain
35
lung
35
muscle of arm
33
adrenal gland
33
retina
33
small intestine
32
islet of Langerhans
32
muscle of leg
32
placenta
31
liver
30
large intestine
29
K562
29
endothelial cell
29
macrophage
28
common myeloid progenitor, CD34-positive
28
fibroblast
28
muscle of back
26
A549
26
left lung
26
thymus
23
CD14-positive monocyte
23
heart left ventricle
23
hepatocyte
23
right lung
22
B cell
22
renal cortex interstitium
22
renal pelvis
22
right kidney
21
spinal cord
21
spleen
20
breast cancer cell
20
pericyte cell
20
pigmented layer of retina
19
HFFc6
18
left kidney
17
adipose tissue
17
keratinocyte
17
pancreas
17
smooth muscle cell
17
tibial nerve
16
MCF-7
16
endothelial cell of hepatic sinusoid
16
subcutaneous adipose tissue
15
EndoC_BH1
15
HepG2
15
caudate nucleus
15
coronary artery
15
endothelial cell of umbilical vein
15
foreskin fibroblast
15
pancreatic ductal cell
14
CD4-positive, alpha-beta memory T cell
14
GM12878
14
H9
14
regulatory T cell
13
T cell
13
astrocyte
13
body of pancreas
13
tibial artery
12
CD4-positive, alpha-beta T cell
12
heart right ventricle
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
osteoblast
12
pancreatic beta cell
12
putamen
12
right atrium auricular region
12
substantia nigra
11
excitatory neuron
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
natural killer cell
11
neutrophil
11
omental fat pad
11
ovary
11
pancreatic acinar cell
11
psoas muscle
11
sigmoid colon
11
skeletal muscle myoblast
10
Rhabdomyosarcoma
10
fibroblast of lung
10
gastric cancer cell
10
pancreatic alpha cell
10
testis
10
thyroid gland
9
Ammon's horn
9
ascending aorta
9
bronchial epithelial cell
9
cardiac muscle cell
9
erythroblast
9
foreskin keratinocyte
9
frontal cortex
9
layer of hippocampus
9
left cardiac atrium
9
liposarcoma
9
muscle of trunk
9
pancreatic delta cell
9
transverse colon
9
trophoblast cell
9
upper lobe of left lung
8
B-lymphoblastoid cell line
8
CD8-positive, alpha-beta memory T cell
8
cerebellum
8
fibroblast cell line
8
fibroblast of cardiac tissue
8
gastrocnemius medialis
8
pituitary stalk
8
prostate gland
8
skeletal muscle tissue
7
HEK293
7
IMR-90
7
Jurkat
7
Peyer's patch
7
T-helper 1 cell
7
aorta
7
choroid plexus epithelial cell
7
left renal cortex interstitium
7
left renal pelvis
7
lymphocyte
7
skeletal muscle satellite cell
7
temporal lobe
6
22Rv1
6
GM06990
6
GM12864
6
GM12865
6
GM19240
6
HAP-1
6
HL-60
6
HUES8
6
LNCAP
6
PC-9
6
breast epithelium
6
colon epithelial cell
6
diffuse intrinsic pontine glioma
6
epithelial cell of prostate
6
iPSC derived cell line
6
induced pluripotent stem cell
6
mononuclear cell
6
right renal cortex interstitium
6
right renal pelvis
6
trophoblast
6
uterus
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BE(2)-C
5
BJ cell
5
CD1c-positive myeloid dendritic cell
5
CD4-positive helper T cell
5
CMK
5
Caco-2 cell
5
Chondroid Chordoma
5
CyT49
5
Ewing sarcoma
5
GM12875
5
GM19238
5
GM19239
5
GM23248
5
HCT-116 cell
5
HT-29
5
KARPAS-422 cell
5
LoVo cell
5
MG63
5
MM.1S
5
SK-N-MC
5
SW480
5
T-helper 17 cell
5
T-helper 2 cell
5
acute myeloid leukemia
5
amygdala
5
chorionic villus
5
dermis blood vessel endothelial cell
5
enterocyte
5
esophageal adenocarcinoma
5
esophagus muscularis mucosa
5
esophagus squamous epithelium
5
fibroblast of dermis
5
glutamatergic neuron
5
hepatic stellate cell
5
mammary gland epithelial cell
5
midbrain
5
neurosphere
5
prostate cancer cell line
5
renal cortical epithelial cell
5
retinal pigment epithelial cell
5
right lobe of liver
5
skeletal muscle fiber
5
smooth muscle cell of the coronary artery
5
thoracic aorta
4
B-lymphocyte
4
C1 segment of cervical spinal cord
Date released
3
February, 2021
Software used
3
macs
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
May, 2022
biosample_type!
in vitro differentiated cells
software_used.software.name!
r
Showing 3 of 3 results
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Download
FileSet
DSR927IPU
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell Expanded_potential_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161DPJ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell KhES-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR084KAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_VAL-3 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP