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Annotation type
1
eQTL
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Genetic variant effects
1
Target gene links
Annotation type Category
ChIP-seq
49
DNase-seq
2
RNA-seq
1
pCHi-C
Available data
1
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
52
HeLa-S3
47
H1-hESC
42
monocyte
38
islet of Langerhans
36
endothelial cell
29
macrophage
26
fibroblast
25
retina
24
hepatocyte
21
EndoC_BH1
21
pancreatic ductal cell
20
pigmented layer of retina
19
HFFc6
19
pericyte cell
19
smooth muscle cell
18
K562
18
neural progenitor cell
18
pancreatic beta cell
17
epithelial cell of proximal tubule
17
induced pluripotent stem cell
17
kidney
17
pancreatic acinar cell
17
pancreatic alpha cell
17
subcutaneous adipose tissue
16
glomerular endothelial cell
16
pancreatic delta cell
15
CD14-positive monocyte
15
liver
15
regulatory T cell
14
excitatory neuron
13
CD8-positive, alpha-beta T cell
13
adipocyte
12
B cell
12
astrocyte
11
T-helper 1 cell
11
adipose tissue
11
cardiomyocytes
11
coronary artery
10
T cell
10
T-helper 17 cell
10
endothelial cell of hepatic sinusoid
10
pancreatic stellate cell
10
pituitary stalk
10
right atrium auricular region
10
tibial nerve
9
extended pluripotent stem (EPS) cells
9
heart
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
natural killer cell
9
progenitor cell of endocrine pancreas
9
skeletal muscle fiber
9
tibial artery
8
GM12878
8
cardiomyocytes (cardiac muscle cell)
8
embryonic stem cell
8
frontal cortex
8
glomerular visceral epithelial cell
8
glutamatergic neuron
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
osteoblast
8
pancreas
8
putamen
8
retinal pigment epithelial cell
7
H9
7
body of pancreas
7
caudate nucleus
7
cerebellum
7
dendritic cell
7
erythroblast
7
heart left ventricle
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
mesangial cell
7
mesenchymal stem cell
7
omental fat pad
7
skeletal muscle satellite cell
7
stomach
6
Ammon's horn
6
CD4-positive helper T cell
6
T-helper 2 cell
6
adrenal gland
6
ascending aorta
6
cardiac precursors (cardiac muscle cell)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
gamma-delta T cell
6
iPSC derived cell line
6
keratinocyte
6
lymphocyte
6
naive B cell
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
spleen
6
substantia nigra
6
type I muscle cell
6
type II muscle cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
HUES8
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
amygdala
5
anterior cingulate cortex
5
basal cell
5
brain
5
central memory CD8-positive, alpha-beta T cell
5
cerebellum (Hemisphere)
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
endothelial cell of umbilical vein
5
fibroblast of cardiac tissue
5
gabaergic neuron
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
neutrophil
5
nucleus accumbens
5
ovary
5
pancreatic endothelial cell
5
psoas muscle
5
skeletal muscle myoblast
5
smooth muscle cell of the coronary artery
5
type II pneumocyte
4
C1 segment of cervical spinal cord
4
CD4-positive, alpha-beta T cell
4
CyT49
4
HepG2
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
SGBS preadipocytes
4
Schwann cell
4
activated CD4-positive, alpha-beta T cell
4
adult endothelial progenitor cell
4
blood vessel smooth muscle cell
4
bone tissue
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
heart right ventricle
Organ
3
lung
Life stage
1
adult
Date released
1
January, 2022
1
March, 2020
1
March, 2024
Software used
1
nospecificsoft_customcode
1
qTLtools
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
May, 2022
January, 2020
annotation_type_category!
ChIP-seq
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR315SRJ
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Lung.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR873OXX
released
Annotation file set
: lung eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR063XFX
released
Annotation file set
: A target gene prediction annotation in Human Lung of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP