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Schema
Citing CMDGA
Clear Filters
Annotation type
13
eQTL
11
gene expression
6
accessible chromatin
3
chromatin state
2
Fine-mapped variants
2
binding sites
2
sQTL
2
variant to gene
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
1
Expression arrays
Available data
2
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
islet of Langerhans
2
tissue
1
monocyte
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Organ
4
pancreas
Life stage
1
adult
Date released
3
March, 2023
1
August, 2021
Software used
3
qTLtools
1
matrix-eQTL
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
November, 2019
Showing 4 of 4 results
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP