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Citing CMDGA
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Annotation type
453
gene expression
445
accessible chromatin
348
target gene predictions
328
candidate regulatory elements
207
histone modifications
197
chromatin state
122
differential activity
99
binding sites
74
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46
eQTL
11
caQTL
5
hQTL
3
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3
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1
other
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
Life stage
1
adult
Date released
1
May, 2021
Software used
1
limix
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
November, 2020
organ_slims!
pancreas
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Download
FileSet
DSR801ZQH
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP