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Citing CMDGA
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Annotation type
5
candidate regulatory elements
3
target gene predictions
2
binding sites
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
19
A549
17
lung
13
left lung
11
right lung
4
fibroblast of lung
3
upper lobe of left lung
2
IMR-90
2
PC-9
2
type II pneumocyte
1
NCI-H226 cell
1
NCI-H460 cell
1
WI38
1
lung microvascular endothelial cell
1
type I pneumocyte
Organ
3
lung
1
epithelium
1
vasculature
Life stage
1
embryonic
1
unknown
Date released
2
September, 2022
1
May, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
month_released!
November, 2020
Showing 3 of 3 results
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FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP