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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
29
small intestine
27
large intestine
10
sigmoid colon
8
transverse colon
7
Peyer's patch
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
4
aorta
4
ascending aorta
4
colonic mucosa
4
duodenal mucosa
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
4
thoracic aorta
3
coronary artery
3
lung microvascular endothelial cell
3
tibial artery
2
HCT116
2
HT-29
2
SW480
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
pulmonary artery endothelial cell
2
smooth muscle cell of the brain vasculature
1
Caco-2
1
LoVo
1
RKO
1
colon epithelial cell
1
kidney capillary endothelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
3
artery
3
blood vessel
3
heart
3
vasculature
0
intestine
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
November, 2020
Showing 3 of 3 results
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Download
FileSet
DSR010DRV
released
Annotation file set
: Candidate regulatory elements for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR401LNJ
released
Annotation file set
: Candidate regulatory elements for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019RRW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE coronary artery
Lab:
AMP-T2D consortium
Project:
AMP