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Schema
Citing CMDGA
Clear Filters
Annotation type
17
candidate regulatory elements
10
target gene predictions
8
chromatin state
4
accessible chromatin
3
binding sites
3
eQTL
2
gene expression
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
tissue
1
cell line
1
primary cell
Biosample term
1
NT2-D1 cell
1
ovary
1
somatic gonadal cell
1
testis
Organ
134
epithelium
56
connective tissue
55
eye
54
pancreas
47
kidney
42
brain
31
vasculature
23
blood vessel
20
heart
20
limb
20
liver
19
musculature of body
14
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
9
lung
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Date released
4
June, 2020
November, 2021
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
November, 2021
Showing 4 of 4 results
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Download
FileSet
DSR815ZSB
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell NT2-D1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR924JBA
released
Annotation file set
: Accessible chromatin annotation for Gonad Testis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007KDG
released
Annotation file set
: Accessible chromatin annotation for Gonad Ovary from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR547ORX
released
Annotation file set
: Accessible chromatin annotation for Gonad Gonad somatic cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP