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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
67
muscle of arm
64
HeLa-S3
58
muscle of leg
54
muscle of back
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
11
esophagus muscularis mucosa
9
skeletal muscle satellite cell
9
stomach smooth muscle
9
uterus
7
LHCN-M2
7
gastroesophageal sphincter
6
skeletal muscle cell
6
skeletal muscle fiber
5
A673
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
5
type I muscle cell
5
type II muscle cell
4
Ishikawa
4
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
endometrium cancer
2
forelimb muscle
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
cervix - ectocervix
1
endometrium
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
5
musculature of body
0
uterus
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
November, 2021
Showing 5 of 5 results
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Download
FileSet
DSR213OLP
released
Annotation file set
: Candidate regulatory elements for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR359BQQ
released
Annotation file set
: Target gene predictions for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR863JWS
released
Annotation file set
: Chromatin states for BSS01549 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746IZY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SJCRH30
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR907POK
released
Annotation file set
: Accessible chromatin annotation for Muscle SJCRH30 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP