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Schema
Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
908
chromatin state
892
accessible chromatin
817
binding sites
671
gene expression
167
differential activity
164
eQTL
140
variant allelic effects
74
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
8
Genetic variant effects
Annotation type Category
4
ATAC-seq
4
snATAC-seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
7
GRCh38
1
hg19
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
tissue
Biosample term
2
CD4-positive helper T cell
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
1
liver
Date released
5
February, 2023
2
October, 2022
1
May, 2022
Software used
6
rasqual
2
matrix-eQTL
1
eigenmt
Lab
5
AMP-T2D consortium
Stephen Parker, UMich
2
Stephen S. Rich Lab @UVA
1
Karen Mohlke, UNC
Project
6
AMP
2
T1D
RFA
6
AMP
2
T1D
month_released!
October, 2019
lab.title!
Stephen Parker, UMich
Showing 8 of 8 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR868SOF
released
Annotation file set
: Chromatin accessibility QTLs in macrophages passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D