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Citing CMDGA
Clear Filters
Annotation type
1671
candidate regulatory elements
1353
target gene predictions
976
histone modifications
944
chromatin state
900
accessible chromatin
725
binding sites
681
gene expression
167
differential activity
164
eQTL
variant allelic effects
74
Fine-mapped variants
5
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Annotation Category
5
Genetic variant effects
Annotation type Category
3
snATAC-seq
2
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
GRCh38
1
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
1
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
liver
macrophage
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
heart
1
connective tissue
1
epithelium
1
liver
Date released
October, 2022
4
February, 2023
1
May, 2022
Software used
5
rasqual
1
eigenmt
Lab
4
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
5
AMP
RFA
5
AMP
month_released!
October, 2022
annotation_type!
variant allelic effects
biosample_term_name!
macrophage
Showing 5 of 5 results
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Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP