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Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
41
variant allelic effects
38
binding sites
28
histone modifications
3
eQTL
1
caQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
3
RNA-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
endothelial cell
1
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1
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Organ
29
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22
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15
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13
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1
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1
small intestine
1
spleen
1
stomach
1
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1
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1
vagina
Life stage
2
adult
Date released
2
February, 2024
1
February, 2020
1
February, 2023
October, 2022
Software used
2
matrix-eQTL
1
qTLtools
1
rasqual
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
3
AMP
1
AMP2
month_released!
October, 2022
Showing 4 of 4 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR876MNY
released
Annotation file set
: Expression QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR651LEH
released
Annotation file set
: cis-eQTLs of tubulointerstitial in NEPTUNE cohort
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR230KPJ
released
Annotation file set
: cis-eQTLs of glomerular in NEPTUNE cohort
Lab:
AMP-T2D consortium
Project:
AMP