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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
109
monocyte
46
CD8-positive, alpha-beta T cell
41
common myeloid progenitor, CD34-positive
30
B cell
29
endothelial cell
27
CD14-positive monocyte
26
fibroblast
23
CD4-positive, alpha-beta memory T cell
21
pericyte cell
19
hepatocyte
19
macrophage
18
smooth muscle cell
16
T cell
16
regulatory T cell
15
CD8-positive, alpha-beta memory T cell
15
astrocyte
15
foreskin keratinocyte
15
keratinocyte
15
natural killer cell
14
endothelial cell of umbilical vein
14
mononuclear cell
14
trophoblast cell
13
foreskin fibroblast
13
osteoblast
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
mammary epithelial cell
12
pancreatic beta cell
12
pancreatic ductal cell
11
fibroblast of lung
11
pancreatic alpha cell
11
skeletal muscle myoblast
10
T-helper 17 cell
10
T-helper 2 cell
10
bronchial epithelial cell
10
mammary gland epithelial cell
10
neurosphere
10
pancreatic delta cell
9
fibroblast of cardiac tissue
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
neutrophil
9
pancreatic acinar cell
9
skeletal muscle satellite cell
8
dermis blood vessel endothelial cell
8
fibroblast of dermis
8
glutamatergic neuron
8
retinal pigment epithelial cell
7
epithelial cell of prostate
7
erythroblast
7
kidney tubule cell
7
skeletal muscle fiber
7
skin fibroblast
7
type II pneumocyte
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
cardiac muscle cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
hepatic stellate cell
6
luminal epithelial cell of mammary gland
6
memory B cell
6
myoepithelial cell of mammary gland
6
naive T cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
renal cortical epithelial cell
5
cardiac fibroblast
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
choroid plexus epithelial cell
5
epithelial cell of esophagus
5
epithelial cell of proximal tubule
5
foreskin melanocyte
5
gabaergic neuron
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
mast cell
5
myofibroblast cell
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
plasma cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
acute myeloid leukemia cell
4
aortic endothelial cell
4
blood vessel smooth muscle cell
4
brain microvascular endothelial cell
4
dermis lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
fibroblast of peridontal ligament
4
fibroblast of the aortic adventitia
4
iris pigment epithelial cell
4
lung microvascular endothelial cell
4
megakaryocyte
4
mesenchymal stem cell
4
mesothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
CD4-positive helper T cell
3
Ishikawa
3
Th1 cell
3
Th17 cell
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
aortic adventitial fibroblast
3
astrocyte of the spinal cord
3
bone marrow cell
3
brain pericyte
3
cardiac fibroblast
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
erythroid cell
3
fibroblast of gingiva
3
fibroblast of the conjunctiva
3
goblet cell
3
kidney capillary endothelial cell
3
mononuclear cell of bone marrow
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
renal epithelial cell
3
schwann cell
3
stromal cell of bone marrow
3
thyroid follicular cell
3
type B pancreatic cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Muller cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
T follicular helper cell
2
Th2 cell
2
activated CD8-positive, alpha-beta T cell
2
alveolar macrophage
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
basal cell of epidermis
2
capillary endothelial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
2
colon goblet cell
2
columnar chondrocyte
2
conventional dendritic cell
2
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epidermal melanocyte
2
epithelial cell of amnion
2
erythroid progenitor cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
gamma-delta T cell
2
glial cell
2
granular cell of epidermis
2
head and neck squamous cell carcinoma
2
intestinal tuft cell
2
leukemic stem cell
2
leukocyte
2
luteal cell
2
mammary stem cell
2
mantle cell lymphoma cell
2
mature NK T cell
2
mature natural killer cell
Life stage
1
adult
Date released
1
August, 2021
Software used
1
macs
Lab
1
Katalin Susztak, Upenn
Project
1
AMP
RFA
1
AMP2
month_released!
October, 2022
Showing 1 of 1 results
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Download
FileSet
DSR914ZWA
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of PT-S1 & PT-S3 cells
Lab:
Katalin Susztak, Upenn
Project:
AMP