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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
68
lung
67
muscle of arm
61
A549
58
muscle of leg
52
left lung
45
right lung
25
tibial nerve
19
tibial artery
18
gastrocnemius medialis
16
upper lobe of left lung
14
fibroblast of lung
10
lower leg skin
8
IMR-90
8
PC-9
8
limb
7
GM23248
7
WI38
7
type II pneumocyte
5
gastrocnemius medialis(Muscle - Skeletal)
5
lung microvascular endothelial cell
4
NCI-H226 cell
4
NCI-H460 cell
4
femur
4
type I pneumocyte
3
arm bone
3
leg bone
2
hindlimb muscle
2
muscle of leg
2
forelimb muscle
2
skin of forearm
1
NCI-H226
1
NCI-H460
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell of artery
1
fibroblast of arm
1
hindlimb muscle
1
lung neuroendocrine cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
Organ
5
epithelium
5
lung
5
vasculature
0
limb
Life stage
5
unknown
Date released
3
September, 2022
2
February, 2021
Software used
2
encode-ccres
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
October, 2022
Showing 5 of 5 results
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Download
FileSet
DSR476YJE
released
Annotation file set
: Candidate regulatory elements for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR052EZN
released
Annotation file set
: Chromatin states for BSS01206 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR724PTV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR948MMS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP