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Annotation type
887
histone modifications
839
target gene predictions
780
binding sites
734
candidate regulatory elements
708
accessible chromatin
433
chromatin state
87
variant allelic effects
12
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9
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5
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5
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3
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2
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2
sQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
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Homo sapiens
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2
primary cell
tissue
Biosample term
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
Life stage
2
adult
Date released
2
May, 2021
Software used
2
limix
2
sqtlseeker
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AMP-T2D consortium
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AMP
RFA
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AMP
month_released!
September, 2018
biosample_type!
tissue
Showing 2 of 2 results
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FileSet
DSR631VBI
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR661WZX
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP