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Schema
Citing CMDGA
Clear Filters
Annotation type
11
gene expression
10
eQTL
3
chromatin state
2
Fine-mapped variants
2
accessible chromatin
2
binding sites
2
sQTL
2
variant to gene
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
Annotation type Category
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
6
dendritic cell
4
adipocyte
4
psoas muscle
3
CD8-positive, alpha-beta T cell
3
adrenal gland
3
cardiomyocytes (cardiac muscle cell)
3
liver
3
pancreas
3
thymus
2
B cell
2
BJAB cell
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
HepG2
2
Jurkat
2
MCF 10A cell
2
T-cell
2
THP-1
2
U937
2
adipose tissue
2
aorta
2
endothelial cell of umbilical vein
2
erythroblast
2
heart left ventricle
2
heart right ventricle
2
lymphocyte of B lineage (iPSC)
2
macrophage
2
mesenchymal stem cell
2
mesendoderm
2
monocyte
2
ovary
2
sigmoid colon
2
small intestine
2
spleen
2
stomach
2
trophoblast cell
1
A549
1
A673
1
Ammon's horn
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
EndoC_BH1
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
bladder (urinary bladder)
1
body of pancreas
1
breast epithelium
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
cell
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
epithelial cell of prostate
1
esophagus
1
fibroblast cell line
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastric (mucosa of stomach)
1
gastrocnemius medialis
1
heart
1
hepatocyte
1
iPS DF 19.11
1
induced pluripotent stem cell
1
inflammatory macrophage
1
islet of Langerhans
1
keratinocyte
1
large intestine
1
lung
1
mammary epithelial cell
1
megakaryocyte
1
megakaryocyte-erythroid progenitor cell
1
muscle of leg
1
muscle of trunk
1
myotube
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neural progenitor cell
1
neuronal stem cell
1
neutrophil
1
osteoblast
1
pancreatic A cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic ductal cell
1
placenta
1
right cardiac atrium
1
skeletal muscle myoblast
1
smooth muscle cell of the coronary artery
1
spinal cord
1
thyroid gland
1
transverse colon
1
trophoblast
1
type B pancreatic cell
1
undifferentiated ESC (H9 cell line)
1
uterus
1
white adipose cell
1
white adipose tissue
Organ
1
pancreas
Life stage
1
adult
Date released
1
January, 2020
Software used
1
chicago
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
September, 2022
award.project!
T1D
assembly!
GRCh38
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR299XDW
released
Annotation file set
: Target gene prediction annotation derived from chromatin loops in islet pcHi-C
Lab:
AMP-T2D consortium
Project:
AMP