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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
eQTL
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
ChIP-seq
2
DNase-seq
2
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
vagina
Organ
798
epithelium
427
kidney
335
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Life stage
3
adult
Date released
September, 2022
2
February, 2021
1
January, 2022
1
March, 2024
Software used
2
encode-ccres
1
qTLtools
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
biosample_term_name!
Fibroblast
Showing 4 of 4 results
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Download
FileSet
DSR851YIE
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Vagina.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR221QNR
released
Annotation file set
: vagina eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR460MOH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE vagina
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860UKY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE vagina
Lab:
AMP-T2D consortium
Project:
AMP