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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
1
accessible chromatin
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
1
DNase-seq
1
HiC
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
23
K562
13
GM12878
6
peripheral blood mononuclear cell
5
GM06990
5
GM19240
5
HAP-1
5
HL-60
5
OCI-LY7
4
CMK
4
GM12873
4
GM12875
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
RPMI8226
3
GM10847
3
GM12872
3
GM12891
3
GM12892
3
GM18526
3
GM18951
3
KBM-7
3
peripheral blood stem cell
2
NAMALWA
2
NAMALWA cell
2
NB4
2
SUDHL6
2
blood
1
DOHH2
1
GM12874
1
Karpas-422
1
SU-DHL-6
1
cerebrospinal fluid
1
whole blood
Organ
5
blood
5
bodily fluid
Date released
September, 2022
2
February, 2021
1
February, 2024
1
June, 2020
1
October, 2022
Software used
3
macs
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
September, 2022
Showing 5 of 5 results
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Download
FileSet
DSR353VNN
released
Annotation file set
: Target gene predictions from Hi-C on lympoblastoid cell lines from 1000G individuals. GM19240
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR253ENB
released
Annotation file set
: Binding sites annotation for GM19240 (GM19240) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642FJQ
released
Annotation file set
: Histone modifications annotation for Blood GM19240 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR919IQH
released
Annotation file set
: Binding sites annotation for Blood GM19240 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR074BUR
released
Annotation file set
: Accessible chromatin annotation for Blood GM19240 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP