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Schema
Citing CMDGA
Clear Filters
Annotation type
3
eQTL
1
candidate regulatory elements
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
3
RNA-seq
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Biosample term
15
keratinocyte
13
foreskin fibroblast
10
foreskin keratinocyte
6
skin fibroblast
4
GM23248
4
dermis blood vessel endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
lower leg skin
3
fibroblast of dermis
3
iPS DF 4.7 Cell Line
3
skin of body
3
suprapubic skin
2
RPMI7951
2
SK-MEL-5
2
basal cell of epidermis
2
dermis lymphatic vessel endothelial cell
2
granular cell of epidermis
2
iPS DF 19.11
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 19.7
1
iPS DF 4.7
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
4
skin of body
Life stage
1
postnatal
Date released
3
January, 2022
September, 2022
1
February, 2021
Software used
3
qTLtools
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
September, 2022
Showing 4 of 4 results
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Download
FileSet
DSR079ISQ
released
Annotation file set
: skin eQTL of studay TwinsUK from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474RUC
released
Annotation file set
: skin sun exposed eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085ZSH
released
Annotation file set
: skin not sun exposed eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159ZKV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS DF 4.7
Lab:
AMP-T2D consortium
Project:
AMP