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Schema
Citing CMDGA
Clear Filters
Annotation type
4
chromatin state
1
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
1
ATAC-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
5
adipocyte
2
ESC derived cell line
2
heart left ventricle
2
islet of Langerhans
2
liver
2
pancreas
2
pancreatic beta cell
1
CD34-PB
1
GM12878
1
H1-hESC
HepG2
1
K562
1
ascending aorta
1
cardiac precursors
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
keratinocyte
1
layer of hippocampus
1
mammary epithelial cell
1
mesenchymal stem cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic ductal cell
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
1
thoracic aorta
Organ
5
connective tissue
Date released
6
September, 2022
5
February, 2021
4
August, 2017
4
February, 2024
4
May, 2021
1
June, 2020
1
November, 2021
1
November, 2022
1
October, 2019
Software used
4
chromhmm
1
macs
Lab
4
Stephen Parker, UMich
1
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
HepG2
Showing 5 of 5 results
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Download
FileSet
DSR645XXX
released
Annotation file set
: Adipocyte accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP