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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ATAC-seq
1
scRNA-seq
Available data
2
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
pancreatic beta cell
2
heart left ventricle
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic ductal cell
1
adipocyte
1
ascending aorta
1
cardiac precursors
1
mesenchymal cell
1
mesenchymal stem cell
1
pancreas
1
pancreatic cell
1
pancreatic delta cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
skeletal muscle satellite cell
1
thoracic aorta
Organ
3
epithelium
3
pancreas
Life stage
1
adult
1
newborn
Date released
4
January, 2021
4
March, 2023
2
February, 2024
2
November, 2021
2
October, 2019
1
August, 2018
1
February, 2021
1
May, 2021
1
September, 2022
Software used
2
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR112LAM
released
Annotation file set
: Pancreatic beta cell accessible chromatin annotation of overlapping ATAC-seq sites from 2 children samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR616QUT
released
Annotation file set
: Pancreatic beta cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR355AID
released
Annotation file set
: pancreatic beta cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP