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Citing CMDGA
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Annotation type
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
1
Gene expression levels
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ATAC-seq
Available data
2
tsv
1
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
3
cerebellum
3
omental fat pad
3
subcutaneous adipose tissue
3
tibial nerve
2
body of pancreas
2
frontal cortex
2
gastrocnemius medialis(Muscle - Skeletal)
2
left ventricle myocardium
2
liver
2
retina
2
right atrium auricular region
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
brain
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cerebellum (Hemisphere)
1
coronary artery
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart left ventricle
1
hypothalamus
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
mesangial cell
1
mesenchymal stem cell of adipose
1
metanephros
1
nucleus accumbens
1
occipital lobe
1
parietal lobe
1
pericardium fibroblast
1
putamen
1
renal cortical epithelial cell
1
renal glomerulus
1
right lobe of liver
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
smooth muscle cell of the coronary artery
1
substantia nigra
1
temporal lobe
1
tibial artery
Organ
3
adipose tissue
3
connective tissue
Life stage
3
adult
Date released
6
September, 2022
3
February, 2021
3
March, 2020
2
February, 2020
2
January, 2020
1
August, 2021
1
September, 2018
Software used
1
gtex_eqtl:V8
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR332YYL
released
Annotation file set
: Gene expression levels of Adipose omental fat pad from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR678YQF
released
Annotation file set
: eQTL of omental fat pad for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR419KCH
released
Annotation file set
: ATAC-seq sites in omental fat pad for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP