Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
Fine-mapped variants
2
variant to gene
1
eQTL
1
sQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
6
RNA-seq
Available data
2
tsv
File set status
6
released
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
14
retina
10
pigmented layer of retina
7
induced pluripotent stem cell
6
islet of Langerhans
4
pancreatic MUC5B+ductal cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic alpha+beta cell
4
pancreatic beta cell
4
pancreatic cycling alpha cell
4
pancreatic delta cell
4
pancreatic ductal cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
EndoC_BH1
3
pancreatic quiescent stellate cell
2
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
1
purified protein and synthetic DNA oligo binding assay
1
smooth muscle cell of the coronary artery
Organ
6
pancreas
Date released
9
February, 2021
8
August, 2021
6
March, 2023
3
January, 2022
3
March, 2020
3
May, 2020
3
May, 2021
2
August, 2017
1
April, 2019
1
February, 2024
1
January, 2018
1
January, 2020
1
June, 2020
1
November, 2019
1
November, 2021
1
September, 2022
0
February, 2023
Software used
6
qTLtools
Lab
6
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR288NOE
released
Annotation file set
: Fine-mapped sQTL
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR795YSV
released
Annotation file set
: Fine-mapped eQTL
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651OZU
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP