Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
9
pigmented layer of retina
8
retina
7
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
4
glutamatergic neuron
3
cardiac fibroblast
2
Ammon's horn
2
adipose tissue
2
cardiac muscle cell
2
caudate nucleus
2
coronary artery
2
frontal cortex
2
heart
2
heart left ventricle
2
kidney
2
omental fat pad
2
pancreas
2
putamen
2
right atrium auricular region
2
tibial artery
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain
1
brain microvascular endothelial cell
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
embryonic stem cell
1
epithelial cell of proximal tubule
1
fetal heart
1
forelimb muscle
1
gabaergic neuron
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
microglial cell/astrocyte
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
nucleus accumbens
1
occipital lobe
1
oligodendrocyte
1
pons
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
tibial nerve
Organ
5
connective tissue
Date released
5
November, 2022
2
February, 2021
0
January, 2020
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
chromatin state
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR632VXG
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956OYT
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR870XSB
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR599ELD
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR696CUX
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Acetabulum E67
Lab:
AMP-T2D consortium
Project:
AMP