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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
2
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
2
DNase-seq
2
RNA-seq
Available data
2
bed bed3+
2
bigWig
1
tsv
File set status
4
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
cell line
Biosample term
7
macrophage
6
lymphoblastoid cell line
4
brain
4
islet of Langerhans
4
putamen
3
cardiac fibroblast
3
blood cell
3
caudate nucleus
3
coronary artery
3
frontal cortex
3
heart left ventricle
3
monocyte
3
pancreas
3
right atrium auricular region
3
skin of body
3
substantia nigra
3
tibial artery
2
Ammon's horn
2
SGBS preadipocytes
2
T cell
2
adipose tissue
2
amygdala
2
anterior cingulate cortex
2
aorta
2
cardiac muscle cell
2
cerebellum
2
endothelial cell of umbilical vein
2
fibroblast
2
heart
2
hypothalamus
2
iPSC derived cell line
2
kidney
2
muscle
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
subcutaneous adipose tissue
2
tibial nerve
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
breast
1
cell
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
epithelial cell of proximal tubule
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
helper T cell
1
hepatic stellate cell
1
hepatocyte
1
hippocampal neuron
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
layer of hippocampus
1
left cardiac atrium
1
left renal pelvis
1
liver
1
lower motor neuron
1
lung
1
microglial cell
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
muscle of leg
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
occipital lobe
1
ovary
1
pituitary gland
1
placenta
1
pons
1
prostate gland
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
sensory neuron
1
skeletal muscle cell
1
small intestine
1
smooth muscle cell of the brain vasculature
1
spinal cord
1
spleen
1
stomach
1
superior temporal gyrus
1
testis
1
thyroid gland
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
3
heart
1
epithelium
1
kidney
Life stage
2
adult
1
child
Date released
9
September, 2022
6
February, 2021
3
February, 2020
3
January, 2020
3
March, 2020
3
May, 2020
2
June, 2020
1
August, 2021
1
January, 2022
1
November, 2019
Software used
2
macs
1
qTLtools
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR976MQB
released
Annotation file set
: heart atrial appendage eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR795KSQ
released
Annotation file set
: Gene expression summary of TPM of heart atrial appendage from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR699UWM
released
Annotation file set
: Accessible chromatin annotation of heart right atrium auricular region from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP