Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
118
monocyte
34
CD8-positive, alpha-beta T cell
15
CD14-positive monocyte
15
EndoC_BH1
11
embryonic stem cell
10
pituitary stalk
6
dendritic cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
4
adipocyte
4
islet of Langerhans
3
cardiac fibroblast
3
B cell
3
cardiac muscle cell
3
coronary artery
3
endothelial cell of umbilical vein
3
pancreas
2
Ammon's horn
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
SGBS preadipocytes
2
T follicular helper cell
2
T-cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
THP-1
2
U937
2
adipose tissue
2
adrenal gland
2
aorta
2
body of pancreas
2
brain
2
caudate nucleus
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
frontal cortex
2
gamma-delta T cell
2
heart
2
heart left ventricle
2
hepatocyte
2
kidney
2
macrophage
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
muscle of leg
2
naive B cel
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
omental fat pad
2
pancreatic acinar cell
2
pancreatic ductal cell
2
putamen
2
regulatory T cell
2
right atrium auricular region
2
stomach
2
tibial artery
2
trophoblast cell
1
hindlimb muscle
1
A549
1
A673
1
B cell, CD19-positive
1
C1 segment of cervical spinal cord
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
SK-N-SH
1
Schwann cell
1
activated pancreatic stellate cell
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
beige adipocyte
1
bipolar neuron
1
brain microvascular endothelial cell
1
brain pericyte
1
breast epithelium
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle
1
cardiomyocytes (cardiac muscle cell)
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
common myeloid progenitor, CD34-positive
1
cytotoxic T cell
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
erythroblast
1
fetal heart
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
forelimb muscle
1
foreskin fibroblast
1
gastrocnemius medialis
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hypothalamus
1
iPS DF 19.11
1
induced pluripotent stem cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
large intestine
1
left cardiac atrium
1
left renal pelvis
1
liver
1
mammary epithelial cell
1
mast cell
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
middle frontal gyrus
1
muscle of arm
1
muscle of trunk
1
myeloid dendritic cell
1
myotube
1
naive regulatory T cell
1
natural killer cell
1
neuronal stem cell
1
nucleus accumbens
1
occipital lobe
1
osteoblast
1
ovary
1
pancreatic A cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
placenta
1
pons
1
psoas muscle
1
quiescent pancreatic stellate cell
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
sigmoid colon
1
skeletal muscle cell
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
stem cell
1
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
thymus
1
thyroid gland
1
tibial nerve
1
transverse colon
Organ
2
adipose tissue
2
connective tissue
Date released
18
September, 2022
5
February, 2021
2
August, 2021
1
January, 2020
1
January, 2022
1
March, 2020
1
May, 2020
1
May, 2021
1
November, 2022
Software used
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR255DSD
released
Annotation file set
: enhancer-gene predicton of adipose_tissue-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR849UDT
released
Annotation file set
: Adipose subcutaneous accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP