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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
cerebellum
3
tibial nerve
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
body of pancreas
2
conventional dendritic cell
2
endothelial cell
2
frontal cortex
2
gastrocnemius medialis(Muscle - Skeletal)
2
left ventricle myocardium
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
omental fat pad
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
regulatory T cell
2
retina
2
right atrium auricular region
2
stellate neuron
2
subcutaneous adipose tissue
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
brain
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cerebellum (Hemisphere)
1
coronary artery
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart left ventricle
1
hypothalamus
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
liver
1
mesangial cell
1
mesenchymal stem cell of adipose
1
metanephros
1
nucleus accumbens
1
occipital lobe
1
parietal lobe
1
pericardium fibroblast
1
putamen
1
renal cortical epithelial cell
1
renal glomerulus
1
right lobe of liver
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
smooth muscle cell of the coronary artery
1
substantia nigra
1
temporal lobe
1
tibial artery
Date released
2
January, 2021
1
January, 2022
1
May, 2020
0
February, 2020
Software used
1
cicero
1
macs
Lab
2
Kyle Gaulton, UCSD
Project
2
T1D
RFA
2
T1D
Showing 2 of 2 results
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Download
FileSet
DSR705YZV
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of activated_CD4_T
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR862VRJ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of activated_CD4_T
Lab:
Kyle Gaulton, UCSD
Project:
T1D