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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
1
target gene predictions
Annotation Category
Genetic variant effects
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ATAC-seq
1
snATAC-seq
Available data
5
bed bed3+
4
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
primary cell
Biosample term
1
astrocyte
1
cell
1
excitatory neuron
1
hippocampal neuron
1
lower motor neuron
Organ
1
brain
Life stage
3
unknown
1
adult
1
embryonic
Date released
2582
February, 2021
2499
September, 2022
373
May, 2021
333
November, 2021
315
February, 2024
288
June, 2020
286
September, 2023
97
August, 2021
91
October, 2022
89
January, 2020
76
May, 2020
64
March, 2023
56
January, 2021
55
March, 2020
48
May, 2022
44
November, 2022
38
February, 2020
35
August, 2017
29
March, 2024
26
February, 2023
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
July, 2020
1
June, 2021
Software used
4
macs
1
cicero
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
biosample_term_name!
ovary
annotation_category!
Genetic variant effects
Showing 5 of 5 results
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Download
FileSet
DSR371MQC
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_iPSC-induced cortical excitatory neurons; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846FJI
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_human primary fetal astrocytes batch 2; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR501BKC
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_iPSC-induced lower motor neurons; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR721DBF
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_iPSC-derived hippocampal DG-like neurons; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751QTO
released
Annotation file set
: Co-accessibility linking chromatin sites across human cell snATAC-seq
Lab:
Bing Ren, UCSD
Project:
AMP