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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
7
macrophage
6
lymphoblastoid cell line
3
blood cell
3
islet of Langerhans
3
monocyte
3
skin of body
2
T cell
2
brain
2
fibroblast
2
iPSC derived cell line
2
muscle
2
putamen
2
regulatory T cell
2
substantia nigra
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
astrocyte
1
breast
1
caudate nucleus
1
cell
1
cerebellar hemisphere
1
cerebellum
1
colon sigmoid
1
coronary artery
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
frontal cortex
1
heart left ventricle
1
helper T cell
1
hippocampal neuron
1
hypothalamus
1
layer of hippocampus
1
liver
1
lower motor neuron
1
lung
1
microglial cell
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neutrophil
1
nucleus accumbens
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
prostate gland
1
right atrium auricular region
1
sensory neuron
1
small intestine
spinal cord
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
testis
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Life stage
1
unknown
Date released
12
November, 2021
1
February, 2024
1
January, 2022
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
spinal cord
Showing 1 of 1 results
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Download
FileSet
DSR371MQC
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_iPSC-induced cortical excitatory neurons; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP