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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
eQTL
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
25
kidney
23
stomach
21
heart
20
breast cancer cell
19
brain
18
lung
17
muscle of arm
16
placenta
15
adrenal gland
15
epithelial cell of proximal tubule
15
muscle of back
15
small intestine
14
common myeloid progenitor, CD34-positive
14
large intestine
13
glomerular endothelial cell
13
left lung
13
muscle of leg
12
islet of Langerhans
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
11
lymphoblastoid cell line
10
diffuse intrinsic pontine glioma
10
renal cortex interstitium
10
right lung
10
spleen
10
thymus
9
Rhabdomyosarcoma
9
cardiac muscle cell
9
foreskin keratinocyte
9
liposarcoma
9
liver
9
mammary epithelial cell
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
heart left ventricle
8
induced pluripotent stem cell
8
neuronal stem cell
8
right kidney
8
spinal cord
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
hESC cell
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
adipose tissue
6
bronchial epithelial cell
6
keratinocyte
6
kidney interstitial cell
6
left kidney
6
macrophage
6
natural killer cell
6
neuroblastoma cell line
6
testis
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
adipocyte
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
fibroblast
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
hepatocyte
5
kidney loop of Henle thin ascending limb epithelial cell
5
neural progenitor cell
5
osteoblast
5
osteosarcoma
5
pancreas
5
prostate cancer cell line
5
subcutaneous adipose tissue
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
T-helper 1 cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
caudate nucleus
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
diffuse large B-cell lymphoma
4
erythroid progenitor cell
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
glomerular visceral epithelial cell
4
monocyte
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
ovary
4
prostate gland
4
regulatory T cell
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
substantia nigra
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
S-shaped body
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T cell
3
T-helper 17 cell
3
T-helper 2 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
astrocyte
3
blood cell
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
cerebellum
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
dermis blood vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endodermal cell
3
epithelial cell of prostate
3
esophagus
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
immortal neural cell line cell
3
kidney cortex collecting duct intercalated cell
3
kidney cortex collecting duct principal cell
3
kidney inner medulla collecting duct principal cell
3
leukemic stem cell
3
lower leg skin
3
melanoma
3
trophoblast cell
3
visceral abdominal adipose tissue
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
Organ
2
artery
2
blood vessel
2
limb
2
vasculature
Life stage
1
adult
Date released
6
September, 2022
3
March, 2020
3
May, 2020
2
January, 2020
1
February, 2020
1
February, 2021
1
January, 2022
1
June, 2020
1
November, 2019
Software used
1
encode-ccres
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR599OOZ
released
Annotation file set
: artery tibial eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241WGS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE tibial artery
Lab:
AMP-T2D consortium
Project:
AMP