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Schema
Citing CMDGA
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Annotation type
2
eQTL
1
binding sites
Annotation Category
2
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
23
stomach
21
heart
20
breast cancer cell
19
brain
18
lung
17
muscle of arm
16
placenta
15
adrenal gland
15
large intestine
15
muscle of back
15
small intestine
14
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of leg
12
islet of Langerhans
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
11
lymphoblastoid cell line
10
diffuse intrinsic pontine glioma
10
liver
10
right lung
10
spleen
10
thymus
9
Rhabdomyosarcoma
9
cardiac muscle cell
9
foreskin keratinocyte
9
liposarcoma
9
mammary epithelial cell
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
heart left ventricle
8
induced pluripotent stem cell
8
macrophage
8
neuronal stem cell
8
spinal cord
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
hESC cell
7
keratinocyte
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
adipose tissue
6
bronchial epithelial cell
6
hepatocyte
6
natural killer cell
6
neuroblastoma cell line
6
testis
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
adipocyte
5
diffuse large B-cell lymphoma
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
fibroblast
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
melanoma
5
neural progenitor cell
5
osteoblast
5
osteosarcoma
5
pancreas
5
prostate cancer cell line
5
subcutaneous adipose tissue
4
22Rv1
4
CD14-positive monocyte
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
T-helper 1 cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
caudate nucleus
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
dermis blood vessel endothelial cell
4
endodermal cell
4
erythroid progenitor cell
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
monocyte
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
ovary
4
prostate gland
4
regulatory T cell
4
sigmoid colon
4
squamous cell lung carcinoma
4
substantia nigra
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T cell
3
T-helper 17 cell
3
T-helper 2 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
astrocyte
3
blood cell
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
cerebellum
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
epithelial cell of prostate
3
esophagus
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
iPSC derived cell line
3
layer of hippocampus
3
leukemic stem cell
3
lower leg skin
3
mesenchymal stem cell
3
mesendoderm
3
mesodermal cell
3
trophoblast cell
3
visceral abdominal adipose tissue
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
Date released
4
February, 2024
2
January, 2022
1
February, 2021
Software used
2
qTLtools
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
kidney
Showing 3 of 3 results
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Download
FileSet
DSR161OPA
released
Annotation file set
: iPSC eQTL of studay PhLiPS from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR490UAY
released
Annotation file set
: iPSC eQTL of studay iPSCORE from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR828KWV
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell iPS_derived_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP