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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
5
DNase-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
120
monocyte
35
CD8-positive, alpha-beta T cell
15
CD14-positive monocyte
15
EndoC_BH1
11
embryonic stem cell
10
pituitary stalk
6
dendritic cell
5
B cell
5
adipocyte
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
5
stomach
4
islet of Langerhans
4
regulatory T cell
3
CD4-positive helper T cell
3
Jurkat
3
T-helper 1 cell
3
U937
3
adrenal gland
3
macrophage
3
osteoblast
3
pancreas
3
pancreatic ductal cell
3
spinal cord
3
trophoblast cell
2
A549
2
BJAB cell
2
GM12878
2
H1-hESC
2
H7-hESC
2
HAP-1
2
HCT-116 cell
2
HT-29
2
HepG2
2
IMR-90
2
K562
2
KARPAS-422 cell
2
LNCAP
2
LoVo cell
2
MCF 10A cell
2
MCF-7
2
MDA-MB-231 cell
2
MM.1S
2
NCCIT cell
2
OCI-LY7
2
PC-9
2
Rh-4 cell
2
T follicular helper cell
2
T-cell
2
T-helper 17 cell
2
T-helper 2 cell
2
THP-1
2
acute myeloid leukemia cell
2
bipolar neuron
2
bone marrow cell
2
breast epithelium
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
erythroid cell
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
gamma-delta T cell
2
gastrocnemius medialis
2
heart
2
hematopoietic multipotent progenitor cell
2
hepatocyte
2
large intestine
2
liver
2
mammary epithelial cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
mesenchymal stem cell
2
mesendoderm
2
muscle of leg
2
naive B cel
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
neuronal stem cell
2
ovary
2
pancreatic acinar cell
2
placenta
2
psoas muscle
2
sigmoid colon
2
skeletal muscle myoblast
2
skin fibroblast
2
small intestine
2
spleen
2
thymus
2
thyroid gland
2
transverse colon
2
uterus
1
786-O cell
1
A-673 cell
1
A172
1
A673
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Ammon's horn
1
B cell, CD19-positive
1
B-Lymphocytes
1
B-lymphocyte
1
BE(2)-C
1
BJ cell
1
CD1c-positive myeloid dendritic cell
1
CD4-Positive T-Lymphocytes
1
CD56-positive, CD161-positive immature natural killer cell
1
CMK
1
COLO-829 cell
1
COLO205
1
Caco-2 cell
1
Caki2
1
D341 Med cell
1
DG-75 cell
1
Daoy
1
ECC-1
1
G-401 cell
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM13976
1
GM13977
1
GM18507
1
GM19240
1
GM20000
1
GM23248
1
GP5d
1
Glioblastoma
1
H4
1
H9
1
HAC cell
1
HBMEC cell
1
HEK293
1
HGF
1
HL-60
1
HUES6
1
HUES8
1
HeLa cell
1
HeLa-S3
1
Hodgkin lymphoma cell line
1
HuH-7
1
HuTu-80 cell
1
Ishikawa
1
KBM-7
1
Kasumi-1
1
L-1236 cell
1
L-428 cell
1
L1-S8
1
L1-S8R
1
LHCN-M2
1
M059J
1
MCF10A-Er-Src cell
1
MG63
1
MOLM-13 cell
1
Myoblasts
1
NAMALWA cell
1
NB-4 cell
1
NCI-H226 cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
OCI-AML3
1
PA-TU-8988T cell
1
PANC-1 cell
1
PC-3
1
Panc1
1
Peyer's patch
1
RCC 7860
1
REH cell
1
RKO
1
RPMI7951
1
RPMI8226
1
RS4-11 cell
1
RWPE1
1
Rh-5 cell
1
Rhabdomyosarcoma
1
SAEC
1
SGBS preadipocytes
1
SJCRH30
1
SJSA1
1
SK-CO-1
1
SK-N-DZ
Organ
5
stomach
Date released
57
September, 2022
22
February, 2021
3
June, 2020
2
May, 2021
1
January, 2022
1
March, 2024
Software used
3
macs
2
abc
Lab
3
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR408DBU
released
Annotation file set
: enhancer-gene predicton of stomach_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR821UNZ
released
Annotation file set
: enhancer-gene predicton of stomach-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR355FEE
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR769DZK
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Gastric primary sample from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936OND
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Fetal stomach from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP