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Citing CMDGA
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Annotation type
5
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Biosample term
9
pigmented layer of retina
7
macrophage
7
retina
6
islet of Langerhans
6
lymphoblastoid cell line
6
retinal pigment epithelial cell
5
chondrocyte
5
putamen
5
substantia nigra
4
Ammon's horn
4
amygdala
4
anterior cingulate cortex
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
cerebellum
4
coronary artery
4
frontal cortex
4
glutamatergic neuron
4
hepatocyte
4
hypothalamus
4
nucleus accumbens
4
right atrium auricular region
4
subcutaneous adipose tissue
4
tibial artery
4
tibial nerve
3
C1 segment of cervical spinal cord
3
SGBS preadipocytes
3
adipose tissue
3
ascending aorta
3
blood cell
3
body of pancreas
3
cerebellum (Hemisphere)
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
gastrocnemius medialis(Muscle - Skeletal)
3
heart left ventricle
3
left ventricle myocardium
3
liver
3
monocyte
3
omental fat pad
3
pancreas
3
psoas muscle
3
right lobe of liver
3
skin of body
2
T cell
2
adrenal gland
2
aorta
2
brain
2
cardiac precursors (cardiac muscle cell)
2
dorsolateral prefrontal cortex
2
embryonic stem cell
2
esophagus
2
fibroblast
2
heart right ventricle
2
iPSC derived cell line
2
lung
2
muscle
2
ovary
2
regulatory T cell
2
small intestine
2
spleen
1
B-lymphoblastoid cell line
1
EndoC_BH1
1
HepG2
1
Leydig cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
astrocyte
1
bladder (urinary bladder)
1
breast
1
cell
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
endothelial cell of umbilical vein
1
esophagus mucosa
1
esophagus muscularis mucosa
1
excitatory neuron
1
fat cell
1
fibroblast cell line
1
gabaergic neuron
1
gastric (mucosa of stomach)
1
heart
1
helper T cell
1
hippocampal neuron
1
layer of hippocampus
1
lower motor neuron
1
lymphocyte of B lineage (iPSC)
1
mesenchymal stem cell
1
mesendoderm
1
microglial cell
1
microglial cell/astrocyte
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
neural progenitor cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
neutrophil
1
non-neuronal cell
1
oligodendrocyte
1
pituitary gland
1
placenta
1
prostate gland
1
right cardiac atrium
1
sensory neuron
1
sigmoid colon
1
spinal cord
1
stomach
1
testis
1
thymus
1
thyroid gland
1
transverse colon
1
trophoblast
1
uterus
1
vagina
1
visceral abdominal adipose tissue
1
white adipose cell
Organ
5
connective tissue
Date released
5
November, 2022
2
February, 2021
0
January, 2022
0
March, 2020
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR632VXG
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956OYT
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal femoral growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR870XSB
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Proximal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR599ELD
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Distal tibial growth plates E67
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR696CUX
released
Annotation file set
: Accessible chromatin of ATAC-seq of chondrocyte Acetabulum E67
Lab:
AMP-T2D consortium
Project:
AMP