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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
pCHi-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
32
neural progenitor cell
20
endothelial cell
18
fibroblast
18
pericyte cell
12
excitatory neuron
12
islet of Langerhans
12
smooth muscle cell
11
macrophage
9
astrocyte
9
hepatocyte
8
H1-hESC
8
kidney
8
liver
6
colon epithelial cell
6
subcutaneous adipose tissue
5
cortical cell of adrenal gland
5
erythroblast
5
inhibitory neuron
5
type II pneumocyte
4
Ammon's horn
4
T cell
4
blood vessel smooth muscle cell
4
cardiomyocytes (cardiac muscle cell)
4
cartilage tissue
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
keratinocyte
4
luminal epithelial cell of mammary gland
4
omental fat pad
4
pancreatic acinar cell
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
B cell
3
C1 segment of cervical spinal cord
3
CD8-positive, alpha-beta T cell
3
adipose tissue
3
amygdala
3
anterior cingulate cortex
3
aorta
3
ascending aorta
3
body of pancreas
3
caudate nucleus
3
cerebellum
3
cerebellum (Hemisphere)
3
coronary artery
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
endocardial cell
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
frontal cortex
3
gastrocnemius medialis(Muscle - Skeletal)
3
heart right ventricle
3
hypothalamus
3
left ventricle myocardium
3
mesothelial cell
3
nucleus accumbens
3
oligodendrocyte precursor cell
3
pancreatic ductal cell
3
psoas muscle
3
putamen
3
right atrium auricular region
3
right lobe of liver
3
schwann cell
3
skeletal muscle fiber
3
substantia nigra
3
tibial artery
3
tibial nerve
3
type I pneumocyte
2
CD4-positive, alpha-beta T cell
2
HepG2
2
Muller cell
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
blood
2
cardiac endothelial cell
2
cardiac precursors (cardiac muscle cell)
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
endothelial cell of hepatic sinusoid
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
heart
2
heart left ventricle
2
intestinal tuft cell
2
kidney distal convoluted tubule epithelial cell
2
luteal cell
2
mammary gland epithelial cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
myoepithelial cell
2
naive t cell
2
non keratinizing barrier epithelial cell
2
oligodendrocyte
2
pancreas
2
pancreatic A cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
renal principal cell
2
respiratory goblet cell
2
right cardiac atrium
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
stromal cell
2
thyroid follicular cell
2
type B pancreatic cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
B-1 B cell
1
B-2 B cell
1
B-lymphoblastoid cell line
1
EndoC_BH1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
T-helper 17 cell
1
adipocyte
1
adrenal gland
1
alternatively activated macrophage
1
aortic valve
1
bladder (urinary bladder)
1
cerebrospinal fluid
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
dendritic cell
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
esophagus
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
gastric goblet cell
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
goblet cell
1
hepatic stellate cell
1
hepatoblast
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left cardiac atrium
1
lung
1
lung neuroendocrine cell
1
lymphocyte of B lineage (iPSC)
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte
1
mesenchymal stem cell
1
mesendoderm
1
metanephros
1
mitral valve
1
natural killer cell
1
neuron
1
ovary
1
parietal epithelial cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
Date released
7
February, 2021
1
March, 2020
0
August, 2021
0
November, 2021
Software used
1
nospecificsoft_customcode
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
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Download
FileSet
DSR870IAS
released
Annotation file set
: A target gene prediction annotation in Human Lymphoblasts of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP