Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
variant allelic effects
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
3
heart
3
islet of Langerhans
3
tibial artery
3
tibial nerve
2
muscle of leg
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
coronary artery
2
heart left ventricle
2
left renal cortex interstitium
2
medulla oblongata
2
midbrain
2
right atrium auricular region
2
right kidney
2
right renal cortex interstitium
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Pancreatic islets
1
Preadipose SGBS cell line (adipocyte)
1
adipose tissue
1
ascending aorta
1
body of pancreas
1
brain
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
caudate nucleus
1
cerebellum (Hemisphere)
1
frontal cortex
1
globus pallidus
1
glomerular visceral epithelial cell
1
heart right ventricle
1
kidney
1
left cardiac atrium
1
left renal pelvis
1
lymphocyte of B lineage (iPSC)
1
middle frontal gyrus
1
muscle of arm
1
occipital lobe
1
pancreas
1
pons
1
putamen
1
renal cortex interstitium
1
renal pelvis
1
retina
1
right renal pelvis
1
subcutaneous adipose tissue
1
superior temporal gyrus
1
thoracic aorta
1
thymus
Date released
2
May, 2020
2
November, 2019
Software used
2
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR181VXG
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835LQY
released
Annotation file set
: Genetic variants with deltaSVM predictions in beta cell iPS-derived pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP