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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
1
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
CD8-positive, alpha-beta T cell
3
memory B cell
3
monocyte
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
regulatory T cell
2
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive regulatory T cell
2
natural killer cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
plasmacytoid dendritic cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
conventional dendritic cell
1
endothelial cell
1
endothelial cell of umbilical vein
1
immature natural killer cell
1
left renal cortex interstitium
1
macrophage
1
medulla oblongata
1
megakaryocyte
1
midbrain
1
myeloid dendritic cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
plasma cell
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
stellate neuron
Date released
13
May, 2021
2
June, 2020
2
May, 2020
1
January, 2021
0
August, 2020
Software used
1
macs
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
Showing 3 of 3 results
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Download
FileSet
DSR234HXR
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of classical_monocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR157QFX
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal monocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125CHQ
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated monocyte
Lab:
AMP-T2D consortium
Project:
AMP