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Citing CMDGA
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Annotation type
6
target gene predictions
Annotation Category
6
Target gene links
Annotation type Category
6
ATAC-seq
6
DNase-seq
6
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Biosample term
121
monocyte
37
CD8-positive, alpha-beta T cell
16
EndoC_BH1
15
CD14-positive monocyte
11
embryonic stem cell
10
pituitary stalk
6
B cell
6
dendritic cell
6
islet of Langerhans
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
5
naive thymus-derived CD8-positive, alpha-beta T cell
4
T follicular helper cell
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
adipocyte
4
central memory CD8-positive, alpha-beta T cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
effector memory CD8-positive, alpha-beta T cell
4
gamma-delta T cell
4
mature natural killer cell
4
memory B cell
4
memory T cell
4
memory regulatory T cell
4
regulatory T cell
3
coronary artery
3
endothelial cell of umbilical vein
3
heart
3
macrophage
3
naive B cell
3
naive regulatory T cell
3
skeletal muscle myoblast
3
tibial artery
3
tibial nerve
2
cardiac fibroblast
2
muscle of leg
2
BJAB cell
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
Jurkat
2
MCF 10A cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T-cell
2
THP-1
2
U937
2
adipose tissue
2
adrenal gland
2
body of pancreas
2
cardiac muscle cell
2
cardiomyocytes (cardiac muscle cell)
2
endothelial cell
2
erythroblast
2
heart left ventricle
2
hepatocyte
2
left renal cortex interstitium
2
medulla oblongata
2
midbrain
2
myeloid dendritic cell
2
naive B cel
2
natural killer cell
2
pancreas
2
pancreatic acinar cell
2
pancreatic ductal cell
2
right atrium auricular region
2
right kidney
2
right renal cortex interstitium
2
stomach
2
thymus
2
trophoblast cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
A549
1
A673
1
Adipose SGBS cell line (adipocyte)
1
B cell, CD19-positive
1
CD56-positive, CD161-positive immature natural killer cell
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
Heart fetal (cardiac muscle cell)
1
HepG2
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
Liver fetal (hepatocyte)
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
Preadipose SGBS cell line (adipocyte)
1
SK-N-SH
1
Schwann cell
1
activated CD4-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
ascending aorta
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
beige adipocyte
1
bipolar neuron
1
brain
1
brain pericyte
1
breast epithelium
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac precursors (cardiac muscle cell)
1
cardiac ventricle
1
caudate nucleus
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
common myeloid progenitor, CD34-positive
1
cytotoxic T cell
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
frontal cortex
1
gastrocnemius medialis
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
iPS DF 19.11
1
immature natural killer cell
1
induced pluripotent stem cell
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
keratinocyte
1
kidney
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
large intestine
1
left cardiac atrium
1
left renal pelvis
1
liver
1
lymphocyte of B lineage (iPSC)
1
mammary epithelial cell
1
mast cell
1
megakaryocyte
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal stem cell
1
mesendoderm
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
muscle of trunk
1
myotube
1
neuronal stem cell
1
occipital lobe
1
osteoblast
1
ovary
1
pancreatic A cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
placenta
1
plasma cell
1
plasmacytoid dendritic cell
1
pons
1
psoas muscle
1
putamen
1
quiescent pancreatic stellate cell
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
right renal pelvis
1
sigmoid colon
1
skeletal muscle cell
1
small intestine
1
smooth muscle cell
Date released
6
May, 2021
1
August, 2021
0
May, 2020
Software used
6
abc
Lab
6
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR599YMO
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_6_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR694OVG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_4_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR015NPU
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_30_minute-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR132FCP
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_2_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR549DHG
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_100_ng-mL_for_1_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR046SIQ
released
Annotation file set
: enhancer-gene predicton of dendritic_cell_treated_with_Lipopolysaccharide_0_ng-mL_for_0_hour-Garber2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP