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Citing CMDGA
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Annotation type
3
accessible chromatin
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
endothelial cell
2
fibroblast
2
macrophage
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
smooth muscle cell
1
CD8-positive, alpha-beta T cell
1
T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
conventional dendritic cell
1
leukocyte
1
liver
1
megakaryocyte
1
memory B cell
1
mesenchymal stem cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic acinar cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
skeletal muscle satellite cell
1
stellate neuron
1
type I muscle cell
1
type II muscle cell
Organ
3
epithelium
Life stage
1
adult
1
unknown
Date released
10
November, 2021
2
February, 2024
2
May, 2022
1
August, 2021
1
January, 2021
Software used
3
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
1
AMP
1
AMP2
1
T1D
Showing 3 of 3 results
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Download
FileSet
DSR897TMQ
released
Annotation file set
: Accessible chromatin from snATAC-seq of endothelial cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR426RPD
released
Annotation file set
: Accessible chromatin annotation of Endothelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR579LZJ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D