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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
9
pigmented layer of retina
7
retina
6
retinal pigment epithelial cell
5
chondrocyte
4
glutamatergic neuron
3
SGBS preadipocytes
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
adipose tissue
1
embryonic stem cell
1
gabaergic neuron
1
microglial cell/astrocyte
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
non-neuronal cell
1
oligodendrocyte
Life stage
1
adult
Date released
2
November, 2022
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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FileSet
DSR817DDX
released
Annotation file set
: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Progenitor).
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR171UQM
released
Annotation file set
: Accessible chromatin of neuron from four postmortem donors, three males and one female, ages 20–28 from a single brain collection.
Lab:
AMP-T2D consortium
Project:
AMP